Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788971.1_cds_XP_016492632.1_773
CDS Infomation

[gene=LOC107811709] [db_xref=GeneID:107811709] [protein=type I inositol polyphosphate 5-phosphatase 4-like isoform X2] [protein_id=XP_016492632.1] [location=complement(join(27799..28021,28188..28336,28454..28562,28670..28863,28946..29573,29664..29768,29855..29942,30052..30123,30459..30546,30642..30671))] [gbkey=CDS]
Sequence

ATGAGAGATGGGAGCTGTAAAAAAACCAAGCTCTCGTGGCCAAAGAGTCTGGTAAAGAAA
TGGTTCAATATCAAGAGCAAGGCTGAGGATTTCCAAGCTGATGATATTGTCTATGGAGGT
GTTGATAATGAATGGAGGAACAACTTCTTAGAGAGGCAGGCTTCCACTAACAAGAAAAAA
AGTAAAACAGACAAGTCAGGGAGAAGGAATGCTGATCGTTTTCATCGAAATAAGATTGAC
CTTGACACTTCAGAGGTTACAGATGTGGATAACTACCGGATCTTTGTAGCTACATGGAAT
GTGGCTGGAAAATCTCCACCGAATAATTTAAATCTTGATGATTGGCTCCATACCTCACCT
CCTGCTGACATCTATGTCCTCGGGTTTCAAGAAATTGTTCCTTTGAATGCTGGCAATGTT
TTGGGGACAGAAGATAATGGTCCGGGTAGAAAATGGCTAGCACTCATCCGAAAAACTCTC
AACAGTCTTCCCGGAACAAGTGGTGGTGGTTATCGTACGCCCTCTCCAGTTCCTAATCCT
GTGGTTGAACTAGATGCTGACTTTGAGGGATCGGCAAGAGAACAAGCCTCGTCTTTCTTC
CATCGTCGCTCATTTCAGACATTAAGCCATAGCATGAGAGTAATGGAGAACGAAATGTCA
ATGCCACGGGCTCAACTTGATCGGCGATTTAGTGTTTGTGATAGAGGTGTGTTTGGGGGT
AGGCCAAGTGATTACGACCCATACGCCCAATGGGGCGGTTCCTCTGATGATGAAAACGGT
CCAGATGATTCACCTATTACGACCCATTGTTCCCCGATTTCATATAGTGGTTCCATCTCT
TTAGAGGACAGAGACAGACAGCCACTGCAATCAAGATACTGTCTTGTTGCGAGTAAGCAA
ATGGTTGGAATATTTCTTACTATTTGGATTAGAAGTGAACTAAGAGATGATGTTCGCAAC
CTGAAAGTGTCTTGTGTTGGTAGAGGATTAATGGGTTATCTAGGGAACAAGGGCTCAATC
TCAGTTAGCATGTCACTGCACCAAACAAGCTTCTGCTTCATTTGTAGTCATTTAACATCT
GGACAGAAAGAGGGAGATGAGCTCCGGAGAAACTCTGATGTCTTGGAGATTCTAAAGAAA
ACAAGGTTTCCAAGGGTTCATGGCTTTGGGGATGACAACTCTCCTCAAACAATCCTCGAG
CACGACCGAATCATATGGCTTGGGGATTTGAACTATCGGATTGCCTTGTCTTACCGAACT
GCCAAGGCACTGGTAGAGATGCGCAATTGGAGGGTGCTGTTAGATAATGATCAGCTGCGG
ATAGAGCAGAGGATGGGACGTGTTTTTAATGGATGGAGTGAAGGAAGAGTATACTTCCCT
CCGACATACAAGTACTCAAGTAATTCAGATAGATATGCAGGAGAGGACACACACCCAAAA
GAGAAACGAAGAACCCCTGCTTGGTGTGATCGCATATTATGGTATGGTCGAGGCCTGCAT
CAAATATCTTATGTTCGTGGAGAGTCCAGATTCTCGGACCATAGACCAGTTTATAGTATA
TTCTTGGCAGAGGTTGAGTCCATCAACCGCCATCGTATCAAGAAAAGTTTGAGTTACGCT
AGCTCTAGGGTTGAAGTTGAAGAGTTATTGCCCCATTCATATGGATATGGTGGATATTAC
TACTAA

Peptide Sequence

PEP ID

XP_016492632.1
PEP Infomation

PREDICTED: type I inositol polyphosphate 5-phosphatase 4-like isoform X2 [Nicotiana tabacum]
Sequence

MRDGSCKKTKLSWPKSLVKKWFNIKSKAEDFQADDIVYGGVDNEWRNNFLERQASTNKKK
SKTDKSGRRNADRFHRNKIDLDTSEVTDVDNYRIFVATWNVAGKSPPNNLNLDDWLHTSP
PADIYVLGFQEIVPLNAGNVLGTEDNGPGRKWLALIRKTLNSLPGTSGGGYRTPSPVPNP
VVELDADFEGSAREQASSFFHRRSFQTLSHSMRVMENEMSMPRAQLDRRFSVCDRGVFGG
RPSDYDPYAQWGGSSDDENGPDDSPITTHCSPISYSGSISLEDRDRQPLQSRYCLVASKQ
MVGIFLTIWIRSELRDDVRNLKVSCVGRGLMGYLGNKGSISVSMSLHQTSFCFICSHLTS
GQKEGDELRRNSDVLEILKKTRFPRVHGFGDDNSPQTILEHDRIIWLGDLNYRIALSYRT
AKALVEMRNWRVLLDNDQLRIEQRMGRVFNGWSEGRVYFPPTYKYSSNSDRYAGEDTHPK
EKRRTPAWCDRILWYGRGLHQISYVRGESRFSDHRPVYSIFLAEVESINRHRIKKSLSYA
SSRVEVEELLPHSYGYGGYYY

Transcript Sequence

Gene sequence data has not been registered.